Specimen Details

ICMP 2758 – Pseudomonas putida (Trevisan 1889) Migula

Data provider:

International Collection Of Microorganisms

Barcode:

ICMP 2758

Type status:

Type strain

Culture type:

Bacterial Culture

Database record added:

25 January 2002

Database record updated:

28 February 2023

Components

Primary component

Active identification

Determined name:

Pseudomonas putida (Trevisan 1889) Migula 1895

Determiner:

Identification date:

Preferred name:

Pseudomonas putida (Trevisan 1889) Migula

Division:

Pseudomonadota

Class:

Gammaproteobacteria

Order:

Pseudomonadales

Family:

Pseudomonadaceae

Identification type:

Determination

Substrate:

Soil

Other identifications

Identification

Determined name:

Pseudomonas putida

Determiner:

Identification date:

Preferred name:

Pseudomonas putida (Trevisan 1889) Migula

Active:

Identification type:

Received as

Collection events

Primary collection event

Collection event type:

Field

Standard locality

Location:

Indiana

Georeferences:

Latitude and Longitude (WGS84): 40 -86 (WGS84 40. -86.)

Verbatim locality:

Indiana

Verbatim collector:

R.Y. Stanier

Standardised collector:

R. Y. Stanier

Verbatim date:

Before May 1970

Start date:

1970-05

Country:

United States

Culture flags

MPI:

Restricted Culture

Price Category:

Category 2

Culture notes

Characterised as:

Biotype A

External links

GenBank:

[TRUNCATED] AP013070 - dnaA, dnaN, recF, gyrB, turC, eptA, czrR, czrS, oprP, cadA1, czcA, czcB, czcC, opdT, hdtS, glyS, glyQ, tag, trkA, rsmB, fmt, def, dprA, rimN, qor, hemF, aroE, betC, trpA, trpB, trpI, osmC, prlC, cynT, coxB, coxA, coxG, coxC, cyoE, katE, znuB, znuC, np20, znuA, thrB, polA, engB, dsbA, kinB, algB, ytjA, gltP, pntB, pntAB, pntA, gcdH, lapD, lapC, lapB, lapA, argH, algR, hemC, hemD, hemX, hemY, algQ, algP, atsC, atsB, atsR, atsK, abgR, desA, tauD, tauC, tauB, tauA, oprE, ssuE, ssuA, ssuD, ssuC, ssuB, ssuF, gshA, ompR, envZ, rimK, hslR, hslO, ppcK, fdhD, nudE, cysQ, dctD, dctB, rmlC, aguA, oprQ, thyX, intB, gabP, yggX, mutY, hisB, hisH, hisA, hisF, sdaA, gbdR, dgcA, dgcB, gbcA, gbcB, ltaE, glyA, soxB, soxD, soxA, soxG, purU, fdhA, creB, creC, creD, msrA, aceF, aceE, glnE, waaF, waaC, waaG, waaP, wapP, wapQ, glcB, rarD, bioB, bioF, bioH, bioC, bioD, acdA, pqqH, pqqE, pqqD, pqqC, pqqB, pqqF, rpoD, dnaG, rpsU, gcp, plsY, folB, cca, prkA, glpE, apaH, apaG, rsmA, pdxA, surA, lptD, rpe, gph, trpE, estP, trpG, trpD, trpC, crp, coq7, argC, erpA, anmK, tyrS, birA, coaX, tuf, secE, nusG, rplK, rplA, rplJ, rplL, rpoB, rpoC, rpsL, rpsG, fusA, rpsJ, rplC, rplD, rplW, rplB, rpsS, rplV, rpsC, rplP, rpmC, rpsQ, rplN, rplX, rplE, rpsN, rpsH, rplF, rplR, rpsE, rpmD, rplO, secY, rpmJ, rpsM, rpsK, rpsD, rpoA, rplQ, katA, bfrA, uvrA, ssb, fdoG, fdhE, selA, selB, ansA, yfcA, oprG, nrdR, ribD, ribE, ribBA, ribH, nusB, thiL, pgpA, ribA, dxs, ispA, xseB, ribB, rtcB, pfeS, pfeR, fecI, ppa, eutC, eutB, hdhA, mpl, acoC, acoB, acoA, acoX, acoR, accC, accB, aroQ, dipZ, ctpL, speA, dinF, pbpC, cueR, copA, bauR, bauA, mmsA, recC, recB, recD, mmsB, mdaB, ggt, pcaH, pcaG, trmA, cioA, cioB, rlmG, fprB, mscL, radA, cstA, folM, mioC, hmgA, fahA, maiA, ldh, cpaC, fecA, algA, algF, algJ, algI, algL, algX, algG, algE, algK, alg44, alg8, algD, moaC, moaD, moaE, rhlB, estB, aapJ, aapQ, aapM, aapP, algW, cysD, cysNC, mdeA, trpS, rplM, rpsI, petA, petB, petC, sspA, sspB, gmhA, rsmI, mraZ, rsmH, ftsL, ftsI, murE, murF, mraY, murD, ftsW, murG, murC, ddl, ftsQ, ftsA, ftsZ, lpxC, secA, argJ, ampG, groS, groL, colR, colS, icmP, bifA, sodB, argP, xenB, acpH, fumA, pykA, sbcB, turA, pcaR, pcaK, pcaF, pcaT, pcaB, pcaD, pcaC, opdF, ttgC, ttgB, ttgA, ttgR, bglX, phaG, rsuA, ung, tctA, tctB, tctC, opdH, nadB, algT, mucA, mucB, mucD, lepA, lepB, rnc, era, recO, pdxJ, cmoB, cmoA, asrA, gcd, oprB2, metR, glpD, glpR, glpK, glpF, argF, grx, bfrB, bfd, rnt, pyrC, argG, nth, rnfG, rnfD, rnfA, metG, mrp, dcd, quiP, estC, pdxH, nhaA, braG, braF, braE, braD, braC, rapA, yhjC, adrA, exuT, dctM, dctQ, dctP, udh, nrdB, nrdA, oprH, phoP, phoQ, dctA, rimO, kup, dinB, proS, oprD, slyX, aspS, ruvC, ruvA, ruvB, ybgC, tolQ, tolR, tolA, tolB, oprL, queC, nadA, bcp, dapA, purC, mqo, xenA, moaB, moaA, rnd, cysK, lpxO, pvdE, azu, fpvA, pvdO, aceK, fecR, quiC, phaJ, fadD2, fadD1, hrpA, ppiA, azoR, gbuA, gbuR, aer, recQ, plpD, trkH, scpA, scpB, aroP, phhB, phhA, phhR, acs, aotJ, aotQ, aotM, aotP, argR, argD, aruF, aruG, astD, astB, astE, alaS, lysC, csrA, mgtE, amrZ, phnN, bkdC, bkdB, bkdA2, bkdA1, bkdR, ycgR, flgN, flgM, flgA, cheR, flgB, flgC, flgD, flgE, flgF, flgG, flgH, flgI, flgJ, flgK, flgL, fliC, flaG, fliD, fliS, fliT, fleQ, ddhB, fleS, fleR, fliE, fliF, fliG, fliH, fliI, fliJ, hptB, fliK, fliL, fliM, fliN, fliO, fliP, fliQ, fliR, flhB, flhA, flhF, fleN, fliA, cheY, cheZ, cheA, cheB, motA, motB, cheW, ccmA, ccmB, ccmC, ccmD, ccmE, ccmF, dsbE, ccmH, sbp, pyk, glxR, hyi, gcl, allA, aqpZ, guaD, xdhC, xdhB, xdhA, smc, zipA, ligA, dnaX, recR, apt, anr, hemN, ccoS, ccoP2, ccoQ2, ccoO2, ccoN2, ccoP1, ccoQ1, ccoO1, ccoN1, pfrI, dsbG, dsbD, pvdH, pvdN, pvdM, pvdP, opmQ, pvdT, pvdR, etfD, etfB, etfA, gltA, sdhC, sdhD, sdhA, sdhB, sucA, sucB, lpd, sucC, sucD, braZ, htpG, fabB, fabA, gpsA, sixA, kdpA, kdpB, kdpC, kdpD, kdpE, mltD, gloB, rnhA, dnaQ, adiA, nuoN, nuoM, nuoL, nuoK, nuoJ, nuoI, nuoH, nuoG, nuoF, nuoE, nuoC, nuoB, nuoA, aceA, gacA, uvrC, pgsA, aphA, ghrA, liuD, liuC, liuB, liuA, treS, glgB, glgX, treY, malQ, treZ, glgA, gnd, zwf, preA, preT, pydB, rnz, blc, nhaB, nudC, est, topB, purB, hflD, mnmA, icd2, icd, cspD, clpS, clpA, infA, ate, aat, ftsK, lolA, rarA, crcB, serS, cysG, tusE, tusB, tusC, tusD, xanP, pcaJ, pcaI, yedK, ycjZ, adhP, modC, modB, modA, galU, gor, ahpC, ahpF, sstT, endA, feaB, feaR, hpaR, hpaI, hpaH, hpaF, hpaD, hpaE, hpaG2, hpaG1, ansB, rbsB, rbsA, rbsC, rbsR, rbsK, rbsD, nuh, thrS, infC, rpmI, rplT, pheS, pheT, ihfA, glsA, metY, lao, folD, pvdA, pbpG, gloA, turB, cobF, ydfG, glcG, glcF, glcE, glcD, glcC, hprA, proC, hyuA, hyuB, aspB, gabD, livK, livG, livF, mrdA, salR, mdlC, benK, yfmT, vanR, vanB, vanA, alr, aspC, yeaX, yeaW, yeaV, dmlA, dmlR, cycA, catR, catB, catC, catA, katG, pssA, pncB, pncA, nrtR, oprB3, macA, idhA, quiA, glnT, garD, tyrB, sdaC, tpx, pgm, fpvR, emrA, emrB, hmgL, pobR, pobA, ilvE, cobW, cobN, intZ, mdcA, mdcB, mdcC, mdcD, mdcE, mdcG, mdcH, mdcL, mdcM, csgE, csgF, csgG, peaR, peaH, peaE, peaA, peaB, peaC, peaD, mobA, ilvA, ogt, ppiC

AJ316160 - recA

NR_114794 - 16S ribosomal RNA

Literature:

Ohji, Shoko; Yamazoe, Atsushi; Hosoyama, Akira; Tsuchikane, Keiko; Ezaki, Takayuki; Fujita, Nobuyuki (2014) The Complete Genome Sequence of Pseudomonas putida NBRC 14164 T Confirms High Intraspecies Variation .Genome Announcements2(1). DOI: 10.1128/genomeA.00029-14

Young, J. M.; Park, D.-C. (2007)Probable synonymy of the nitrogen-fixing genus Azotobacter and the genus Pseudomonas . International Journal of Systematic and Evolutionary Microbiology 57(12)2894-2901. DOI: 10.1099/ijs.0.64969-0

Culture links

Is Same As:

ICMP 12796
ICMP 3510

Culture events

Deposited:

Note:

Derived from earliest batch date

Actioned by:

Douglas W. Dye

Date:

01 May 1970 (Verbatim: 01 May 1970)

Transferred via:

Actioned by:

R. Y. Stanier (Reference number 90)

Duplicates

American Type Culture Collection: ATCC 12633

Direction:

Duplicate

NCIMB (UK): NCIB 9494

Direction:

Duplicate

Assigned reference numbers

NZRCCNo:

NZRCC 10269

PDDCC:

PDDCC 2758

Permissions

Project permits

Project title:

Local Contexts - ICMP Culture Collection

Reference:

ICMP Collection - Local Contexts

Biocultural (BC) Notice